If You Think You Have COVID But Your Rapid Test Is Negative, Here’s Why

Can you test negative for COVID but still have it? This is why it seems to take so long for a rapid test to turn positive.

BuzzFeed News

Last month I had strep throat–level pain while living with two people who were confirmed COVID positive. Yet, several rapid tests kept telling me I was COVID-free.

It’s a confusing experience shared by many as the highly transmissible Omicron variant continues to spread in the US. At the same time, millions more at-home rapid tests are becoming available. (And by available, I mean there are more of them, but you can’t always find them at your local store. You can order free rapid tests from the government here.)

While PCR tests are still the gold standard, they can take a few days to a week or more to produce results as understaffed labs struggle to keep up with demand. Rapid tests are a welcome addition because they can give results in minutes. But beware of the dreaded false negative.

It happened to Georgia resident and economist Christopher Cunningham, 46, whose 16-year-old daughter had a positive result on a PCR test on Jan. 7 and again 10 days later. Her rapid tests, however, always came back negative. The same thing happened to his 9-year-old daughter. (Both were vaccinated.)

But just because your rapid test takes a while to turn positive ⁠— or doesn’t at all ⁠— it doesn’t mean you’re free of infection or that your test is a fraud.

It could happen because you were vaccinated, you missed the window when it would’ve turned positive, you collected your test sample incorrectly, or you need to test again in a few days, according to Dr. Emily Landon, an infectious disease expert and associate professor of medicine at the University of Chicago Medicine. (Keep in mind your symptoms could have a non-COVID cause, too — the flu is circulating.)

Here’s how rapid tests work and why you can get false negative results when you have COVID, particularly in the early stages of infection.

How rapid tests work

Rapid COVID tests, also called antigen tests, work by detecting bits of proteins on the surface of the coronavirus. They only appear positive when your body has a certain amount of virus, or viral load, which means they may not detect COVID cases that don’t reach that threshold.

And most importantly, Landon noted, rapid tests can be negative early in your infection even if you’re feeling symptoms because it may take a while before there’s enough virus for the test to pick up. (Your vaccination status can influence this process, too, but more on that later.)

This relatively high threshold correlates with contagiousness, experts say. If your rapid test is positive, you’ll definitely want to isolate yourself from others, Landon said. If it’s negative later on in the course of your infection, after symptoms resolve, you’re likely no longer infectious.

“Rapid tests are definitely not like a pregnancy test where it's going to be positive as long as it's been a few weeks after someone missed a period,” she said. “It's only going to pick it up when you're at peak infectiousness, and they’re almost never false positive.”

In fact, there’s no need to confirm a positive rapid test result with a PCR test, Landon added. (The FDA and CDC agree.)

“Rapid tests are really reliable,” Landon said. “You don't need to swear at the company and say, ‘There's no way I could have COVID’; you definitely have COVID. You need to stay home.”

There’s a relatively small window when a rapid test will be positive

You can think of your viral load like a mountain, says Dr. Martin Blaser, a professor of medicine and pathology and laboratory medicine at Rutgers Robert Wood Johnson Medical School. “It kind of goes up sharply to a peak and then it starts to decline eventually down to zero.”

However, the window of peak viral load when rapid tests will appear positive can be relatively short, Landon said, and some people are going to miss it entirely, which could explain my and many others’ experience.

The window varies widely, too; it could last three days, six days, or even a week or more for some people because everyone clears the virus from their system at their own pace, she said.

In what seems like another layer of complexity, the intensity of that second line on your rapid test is likely an indicator of infectiousness, experts say. The darker it is (and the quicker it appears within the 15-minute wait period), the higher your viral load and risk of spreading the virus, and vice versa.

You should take more than one rapid test

If you have coronavirus symptoms and test negative on a rapid test, Landon suggests you confirm that result with a PCR test or take another rapid within the next two days.

While rapid tests are specific and are unlikely to generate a false positive, they aren’t that sensitive, meaning they are more likely to generate a false negative than some other tests.

On the other hand, PCR tests are much more sensitive. They look for the tiniest fragments of coronavirus genetic material by multiplying the virus over a million times until it becomes detectable, Blaser told BuzzFeed News. This means PCR tests could be positive even though you’re no longer contagious because they can pick up on really low viral loads.

These tiny viral remains could also be zombies: pieces of dead virus that can’t make you or others sick.

The takeaway: Don’t be surprised if your PCR test stays positive for weeks or months after initial infection. It’s normal and common.

The CDC says you can end isolation after five days if you have not had a fever for 24 hours and other symptoms are resolving. After that, they suggest caution for an additional five days, including mask-wearing, avoiding travel, and staying away from people who are at high risk.

You don't need to have a negative result to end isolation, but if you do want to take a rapid antigen test, they suggest testing near the end of the five-day period when you have been fever-free for 24 hours (without taking fever-reducing medicine). If it's still positive, you should isolate for the full 10 days.

Rapid tests results are unrelated to symptoms

One of the most important things you should remember about rapid COVID tests is that they aren’t influenced by symptoms — they only turn positive if your nasal swab has enough virus it can detect. While logically you might think more virus equals more symptoms, that’s not always the case.

Your runny nose and muscle aches are just your body’s reactions to it fighting the coronavirus off, and that reaction varies depending on if you’ve encountered the germ before, either from an infection or vaccination. It could take several days after symptoms appear for your body to produce a viral load that’s to the rapid test’s liking.

Having symptoms can be a bonus, however, because they can help you decide when to take your rapid test to ensure you get the most accurate results possible.

“People who are asymptomatic pretty much have the same rise and fall in viral load as people who are symptomatic,” Blaser said. “So, you don't really know where you are in that cycle.”

As we learned early in the pandemic, you can still spread the coronavirus even if you’re symptom-free. This means rapid tests are also helpful tools for asymptomatic people, though it’s harder to tell when to take a test without symptoms to guide you, Landon said.

Moreover, time isn’t on your side, Landon admitted. Rapid test results can change quickly as your viral load rises and drops, often within hours, so if you don’t have COVID symptoms, taking a rapid test “right before you have an event is much better than using it the day or morning before because in 12 hours that test could read positive.”

It’s unclear how viral load differs between symptomatic and asymptomatic people infected with the Omicron variant, but many early studies found it was comparable among the groups.

Jane Barlow / PA Images via Getty Images

A Covid-19 rapid antigen test (lateral flow self-test) showing a negative result.

Your vaccination status can affect your test results

Back when the never-before-seen COVID-causing virus started raging, people would experience symptoms much later in an infection compared to now. That’s because the population as a whole was “immunologically naive,” Landon said, so it took some time for immune systems to catch up (aka show symptoms) when the virus was multiplying rapidly.

This delayed reaction could still be occurring in those who’ve managed to dodge coronavirus infection or who are unvaccinated.

Among the vaccinated, however, is a different tale; they’re now experiencing symptoms earlier in their infection, and at a much lower viral load because their bodies already know how to attack the virus.

“This is what you want,” Landon said. “You want your immune system to react to and kill the virus before it does all the tissue damage during its peak viral load.”

In other words, it’s pretty common for vaccinated people to have delayed positive rapid tests despite symptoms.

Landon said vaccinated folks can expect to see a positive rapid test result one to three days after symptoms start. However, rapid tests may turn positive earlier in some unvaccinated people.

In general, vaccinated people with healthy immune systems will have symptoms that are milder and less likely to lead to hospitalization and death than people who are unvaccinated.

It’s not a test problem — it could be a you problem

In addition to poor timing, the accuracy of your rapid test depends on how well you follow instructions.

If you swab your nose incorrectly or drop too much of the liquid onto the test, you can end up with a false negative. “As much as I think Americans are perfectly capable of doing this,” Landon said, “you could be making a mistake that you don't realize you're making, so it's always important if you're getting a negative to get it confirmed.”

Dr. Michael Mina, a former Harvard epidemiologist who is now the chief science officer of eMed, a digital platform that facilitates at-home testing, said you should avoid the “snot and gooey stuff” when swabbing your nose.

“The virus lives in the cells lining your nose,” Mina tweeted on Jan. 24. “You want the swab to rub against and ‘scrape’ the cells of the nasal walls for the best sample. That said — it’s ok if you do get the snot. Just isn’t the target.”

Where you collect your sample could make a difference, too, Mina noted.

All FDA-authorized rapid tests require nasal swabs, but some people have posted on TikTok and other social media platforms saying a throat and nasal swab combination turned positive before a nasal swab alone.

“Biologically I support that. And it’s what I have done for a long time. It can boost sensitivity,” Mina tweeted Jan. 20. “But don’t only use a throat swab. I do think that’s a bad idea.”

One non-peer-reviewed study released Jan. 19 led by researchers at the University of California, San Francisco, found the BinaxNOW rapid test was 98% sensitive with nose swabs and 49% sensitive with throat swabs, which means false negatives were more common with a throat sample; sensitivity with a combined nose and throat swab didn’t offer much of a boost.

Experts agree: You should follow the instructions when performing a rapid test and avoid swabbing just your throat.

After five days of throat pain, neither my two rapid nor two PCR tests came back positive, even though my COVID-carrying roommates and I had shared all living spaces without precautions.

Did my three vaccine doses keep my viral load low enough to evade the tests? Did I complete my rapid tests accurately? Did I even have COVID?

Honestly, we may never know for sure.

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